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Academic Experience

 
 
 
 
 

Research Scientist/Postdoc Fellow

Harvard Medical School/Broad Institute/Brigham and Women’s Hospital

Jan 2017 – Present Boston, MA
 
 
 
 
 

Teaching Assistant

Worcester Polytechnic Institute (WPI)

Aug 2013 – Dec 2016 Worcester, MA
 
 
 
 
 

Research Associate

Chinese Academy of Sciences

May 2012 – Jun 2013 Shenzhen, China

Recent projects

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RA and RA-associated lung disease

Identifying pathogenic states between RA and RA-ILD

Single-cell integration of multiple inflamed tissues

Finding common pro-inflammatory and anti-inflammatory cell states in the myeloid population across RA, SLE, IBD, etc

CV

Updated by 2020-08-20

If you’d like to learn more about my work, you can find my CV here.

Selected Publications

Code, data, and pdf for each paper are provided. Ask me for questions.

Quickly discover relevant content by filtering publications.

[Nature Experimental & Molecular Medicine, 2020] In this review, we highlight emerging themes in computational analysis of …

[Nature Method, 2019.] The emerging diversity of single-cell RNA-seq datasets allows for the full transcriptional characterization of …

[ICSA Book Series in Statistics. Springer, Cham, 2019] Mixed membership factorization is a popular approach for analyzing data sets …

[Science Translational Medicine, 2019] Macrophages tailor their function to the signals found in tissue microenvironments, taking on a …

[Nature Immunology, 2019] Lupus nephritis is a potentially fatal autoimmune disease for which the current treatment is ineffective and …

[BMC Bioinformatics, 2017] We propose a Bayesian statistical model and a variational expectation maximization (EM) algorithm to …

[Bioinformatics, 2015] We present a novel variant calling algorithm that uses a hierarchical Bayesian model to estimate allele …