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Selected Publications

Code, data, and PDF are provided. Ask me for questions.

Single-cell batch effect correction, integration of scRNA-seq with spatial transcriptomics data

Global optimization, benders decomposition, mixed membership matrix factorization

Recent projects


Single-cell integration of inflammatory diseases tissues

Macrophage, single-cell integration, inflammatory disease, COVID-19

Single-cell multi-model CITE-seq integration of RA

Single-cell multi-omics, CITE-seq, RA synovium, AMP

RA and RA-associated lung disease

Single-cell integration, cross-disease tissue


Updated by 2021-02-20

If you’d like to learn more about my work, you can find my CV here.